EpiScope MSP Kit

DNA methylation profiling Gene specific profiling - HEK 293T NELL2

Experiment
DNA methylation profiling Gene specific profiling - HEK 293T NELL2
Product
EpiScope MSP Kit from Takara Bio Inc
Manufacturer
Takara Bio Inc

Protocol tips

Upstream tips
For best results, the CT Conversion Reagent should be prepared freshly and used immediately following preparation.
Protocol tips
Always include fully methylated (in-vitro methylated DNA) and non-methylated controls (Leucocyte DNA, DNMT1/3 double KO DNA) during MSP

Publication protocol

Quantitative RT-PCR, methylation-specific PCR, and bisulfide sequencing PCR
Quantitative RT-PCR (qPCR) was carried out with first-strand cDNAs of the cell lines and SYBR PremixEx TaqII (Takara Bio, Otsu, Japan) using the Viia7 system (Life Technologies, Carlsbad, CA, USA). Unmethylated cytosines in the genomic DNAs from the cell lines were converted to uracil by bisulfide reactions using the EZ DNA Methylation-Gold Kit (ZYMO Research, Irvine, CA, USA). Methylation-specific PCR (MSP) was carried out using the TaKaRa EpiScope MSP Kit. Bisulfide sequencing PCR (BSP) was carried out using the bisulfide-treated genomic DNAs and EpiTaq HS (Takara). The PCR products were inserted into the pGEM-T easy vector (Promega KK, Tokyo, Japan) and transformed into DH5α, and plasmids isolated from 10 colonies of each sample were sequenced.

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Reviews

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Discussion

Discussion

4 years ago

Author: Jody Hancock Canada

How can I preserve leukocytes for DNA methylation profiling?

I would like to preserve leukocytes for future epigenetic analysis. How can I preserve them effectively in order to perform DNA methylation profiling at a later time?

Share your thoughts or question with experts in your field by adding a discussion!

Papers

Check out relevant papers found by Labettor's AI that are relevant for performing DNA methylation profiling Gene specific profiling - HEK 293T NELL2 using EpiScope MSP Kit from Takara Bio Inc.

Paper title
Expression and regulatory effects on cancer cell behavior of NELL1 and NELL2 in human renal cell carcinoma
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Manufacturer protocol

Download the product protocol from Takara Bio Inc for EpiScope MSP Kit below.

Download PDF Download manufacturer protocol

Videos

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