NaeI NEB#R0190

Restriction Enzymes PdiI / NaeI

Experiment
Restriction Enzymes PdiI / NaeI
Product
NaeI NEB#R0190 from New England BioLabs
Manufacturer
New England BioLabs

Protocol tips

Protocol tips
For the NaeI experiments, 50 units ml−1 NaeI (NEB), were added in NEBuffer 2 (NEB) supplemented with 100 μg ml−1 BSA and 3.66 μg ml−1 unlabeled background dsDNA.

Publication protocol

The basic magnetic tweezers protocol has been described (19). Images were acquired with a frequency of 60 Hz. In brief, DNA constructs were bound to 1-μm streptavidin-coated superparamagnetic microspheres (Invitrogen) and flushed into a flow cell, with a bottom cover slip coated with anti-digoxigenin. Subsequently, 15 nM EcoPI or EcoP15I were added in buffer R (50 mM Tris·HCl, pH 8.0, 50 mM KCl, 10 mM MgCl2, 1 mM DTT, and 100 μg ml−1 BSA, 20 ± 2°C) plus 4 mM ATP. Where indicated the buffer was supplemented with 100 μM AdoMet. For the NaeI experiments, 50 units ml−1 NaeI (NEB), were added in NEBuffer 2 (NEB) supplemented with 100 μg ml−1 BSA and 3.66 μg ml−1 unlabeled background dsDNA.

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Manufacturer protocol

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